Here's a visual aid to this problem with the options of AI draft picks disappearing. In the 3rd season of a MLB quick start I'm seeing these top prospects that are completely unready for the pros all over, buried on the benches of MLB teams.
I'm having to manually send these guys down to their farms and give them their options back. And I'm having to do this for every team, and foresee having to do this every season until this bug is fixed. It's highly annoying.