I just set one up using setup Real World League using just the MLB...
Advanced Setup - deleted all of the Minor League Teams...
Added a AAA League of two divisions 6 teams each...
Deleted all Free agents...
Changed AAA to Major League...
Deleted MLB league which puts all players from those teams into free agent pool... Setup financials and other options/rules on the new league...
Setup Draft, ran Draft 23 rounds...
Simmed one year and everything looks good to me... Just the one league with the 12 teams...
May want to give this a try...
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