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So in reviewing each analysis of the results and going back to my original questions - "For best results, do I need to do anything with League Totals, Modifiers, the era_stats or era_modifiers files, etc.? Or just roll with it?" - I think the answer are "no" and "just roll with it."
In looking at HR rates and HR rates per 550 AB's, they seem really close. The slight differences may be attributable to the fact that batters were facing a bit poorer pitching overall (due to the presence of four teams with primarily AAA-level pitching), but they are not so different to suggest that anything would need to be done with those various files. At least that's my conclusion based upon this limited testing. Agree?
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